PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4S04462.40
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family ERF
Protein Properties Length: 125aa    MW: 14135.5 Da    PI: 11.3203
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4S04462.40genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP242.31.9e-1391124239
            AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgta 39 
                     y+GVr+++ +g+W+AeIrdp+    r +r++lg+f ta
  Jcr4S04462.40  91 NYRGVRQRP-WGKWAAEIRDPR----RaTRVWLGTFNTA 124
                    59*******.**********82....48********995 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003805.9E-691125IPR001471AP2/ERF domain
PROSITE profilePS5103216.51591125IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.0E-1891124IPR001471AP2/ERF domain
CDDcd000181.30E-1891124No hitNo description
SuperFamilySSF541712.62E-1191124IPR016177DNA-binding domain
PfamPF008472.7E-891123IPR001471AP2/ERF domain
PRINTSPR003673.8E-992103IPR001471AP2/ERF domain
PRINTSPR003673.8E-9114125IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 125 aa     Download sequence    Send to blast
MLSPATPPVA QRWLQISHRF VNSPPMVMVI VLVTPLPSVT GAVATTYHLV FTNASDLDTC  60
SICKINGCLG CNFFPPNQEE KKGRRKRIKK NYRGVRQRPW GKWAAEIRDP RRATRVWLGT  120
FNTAV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012066876.15e-44PREDICTED: ethylene-responsive transcription factor ERF109-like
SwissprotQ9SZ069e-24EF109_ARATH; Ethylene-responsive transcription factor ERF109
TrEMBLA0A067LCS43e-44A0A067LCS4_JATCU; Uncharacterized protein
STRINGPOPTR_0009s10470.18e-32(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF29623072
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.12e-23redox responsive transcription factor 1